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Alan Ruttenberg's profile
I'm a Boston user
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What I do
I work for Science Commons on the Neurocommons building and collaborating with others to build biological knowledge bases, applications that use them to analyze experimental data, and sharing the knowledge using semantic web technologies so that others can use it to build tools we can’t.
We’re currently focused on supporting the neurosciences, but expect to expand scope. -
Affiliations
Current affiliations
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- Position
- Principal Scientist
- Company
- Science Commons
- Further information
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Interests
No interests have been listed by Alan Ruttenberg.
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Projects
Semantic Web Health Care and Life Sciences Interest Group, BioPAX, Ontology for Biomedical Investigations, LSW, W3C OWL Working Group
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Publications
Ruttenberg A, Clark T, Bug W, Samwald M, Bodenreider O, Chen H, Doherty D, Forsberg K, Gao Y, Kashyap V, Kinoshita J, Luciano J, Scott Marshall M, Ogbuji C, Rees J, Stephens S, Wong GT, Elizabeth Wu, Zaccagnini D, Hongsermeier T, Neumann E, Herman I, Cheu. Advancing translational research with the Semantic Web BMC Bioinformatics (2007)
Smith B, Ashburner M, Rosse C, Bard J, Bug W, Ceusters W, Goldberg LJ, Eilbeck K, Ireland A, Mungall CJ, The OBI Consortium, Leontis N, Rocca-Serra P, Ruttenberg A, Sansone S, Scheuermann RH, Shah N, Whetzel PL & Lewis S. The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration Nature Biotechnology , 1251 - 1255 (2007)
Connectedness Profiles in Protein Networks for the Analysis of Gene Research in Computational Molecular Biology: 10th Annual International Conference, RECOMB (2006)
Edge-count probabilities for the identification of local protein communities and their organization Proteins (2006) PubMed ID:(16372355)
What BioPAX communicates and how to extend OWL to help it OWLED-2006 (2006)
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Alan Ruttenberg's activity on Nature Network
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