• Wonderland of Biophysics by Joseph Zhou

    My understanding of biophysics, questions, journal reviews and latest development in this field

    • A dialogue about single heavy hammer vs. multi-hammer approach

      Friday, 29 Aug 2008 - 19:39 UTC

      Several days ago, I post a paper about Chinese traditional medicine, in which a problem of hammer vs. multi-hammer approach was raised.

      I discussed with my colleague in bio-network research. It turns out that it convinced my guess: multi-hammer approach could be more efficient than single heavy hammer approach.

      *Problem: *
      For a stable network with robustness, which way has more effects on it: change one route heavily, or change several place slightly?

      Formulated question:
      Supposing there is a food web, if I want to decrease an animal (for example mouse’s) food quantity by 50%, which is more efficient to reach this goal: change one chain in food web by 90%, or change several route by 30%?

      *Answer: *
      Food webs and other evolved biological networks almost always tolerate a 90% change of a RANDOMLY picked link, however the same networks disintegrate if a link with high betweenness centrality is INSIGHTFULLY SELECTED. So if you compare to a strong but RANDOM link change then I could imagine that SEVERAL small changes have a higher chance to hit a link of high betweenness centrality for which even a small change has more impact on the whole network than the single, random, large change. For ODE dynamics on networks there is a powerful concept of Metabolic Control Analysis (MCA) to access the impact of link changes.

      Last updated: Friday, 29 Aug 2008 - 19:39 UTC


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