• PhD to be by Elizabeth Moritz

    The final year of graduate school is upon me and my quest to be a PhD is invariably thwarted by the whimsy path research tends to meander down. A little guidance and a lot of patience will be paramount as I make the final push!

    • Thesis Outline - The Easy Part?

      Friday, 03 Apr 2009 - 12:50 UTC

      Not too long ago my PI gave me the green light to come up with an outline
      for my thesis. I take this as a very positive sign that he and I both
      have the same timeline in mind for my graduation date.

      I am excited to be starting my thesis in any form, though I have a
      feeling that this is the easiest part. I can make a rough outline of
      my thesis in under 2 minutes. It would go as follows:

      1) Introduction

      2) Chapter 1 – “An Auspicious Beginning”
      *Project from first two years of grad school that led to a publication

      3) Chapter 2 – “Why Grad School Takes So Long”
      *Torturous time concerning third and fourth years of grad school when
      the highs and lows of research were at their greatest

      4) Chapter 3 – “Still Under Construction”
      *Triumphant return of successful science and meaningful results
      *All three projects finished and tell a complete story

      5) Conclusion

      6) References

      Of course, this sort of outline isn’t very helpful to my writing and I
      highly doubt this is what my PI is looking for from me.

      So I’m wondering, how detailed did you make your outline? Did you make
      it just for yourself or did you share it with your PI?
      Happy writing!

      Last updated: Friday, 03 Apr 2009 - 12:50 UTC

      • Comments

        • Date:
          Friday, 03 Apr 2009 - 12:57 UTC
          Bob O'Hara said:

          Shouldn’t there be a chapter between your 3 and 4 detailing the nervous breakdown?

        • Date:
          Friday, 03 Apr 2009 - 13:05 UTC
          Ted Erickson said:

          I would make sure that you and your PI are clear on the format of the thesis. I have seen students write their thesis with all introduction at the start, then all results followed by conclusions. Once they have turned it into their PI they are told that they want each project written into its own chapter (intro/results/conclusions – repeated for each project).

        • Date:
          Friday, 03 Apr 2009 - 13:35 UTC
          Maxine Clarke said:

          I agree the order is important. I did all my results and figures first, then wrote the discussion, then the intro at the end. (Bit hazy about the methods and the refs.) But definitely, the structure of the thesis is one that you and your supervisor can interact about so that when you do start writing you have an agreed framework. Therefore, it seems to me that your post is very much along the right lines ;-) I think it can only help to get plenty of feedback before you have put in masses of solitary effort.

        • Date:
          Friday, 03 Apr 2009 - 13:44 UTC
          Eva Amsen said:

          I had to share mine with my entire supervisory committee (my own supervisor and two other people) and it was basically a list of the title chapters and bullet points of the main results.

        • Date:
          Friday, 03 Apr 2009 - 14:02 UTC
          Cristian Bodo said:

          Don’t forget to include the section on outstanding, groundbreaking future results that would be derived from your project if you actually had the time to keep working on it for an extra couple of years but you won’t because you want to graduate

        • Date:
          Friday, 03 Apr 2009 - 15:27 UTC
          Richard Wintle said:

          In my department, the formula was so set that there wasn’t really a point in writing an outline.

          - Title page, copyright, all that jazz
          - Acknowledgments
          - TOC, lists of figures and whatnot
          - Introduction and literature review
          - Data chapters (usually three)
          - Summary and future directions
          - Appendices containing lots of interesting data and stuff that you forgot to put in earlier

          I found it helpful to do the title page and the acknowledgments first – get the easy stuff out of the way ;)

          All flippancy aside, the best advice I got (from a fellow, more senior grad student) was to do the figures and legends first, thereby laying out the story. For me, anyway, this really helped in crystallizing how the thing was going to go. You could provide a list of the figures and key findings represented by each one to your supervisor – that might be a useful way of outlining it?

        • Date:
          Friday, 03 Apr 2009 - 20:21 UTC
          Viktor Poór said:

          Usually, I start with the Materials and Methods, as that’s a straightforward chapter, easy to write and helps me to “warm up”.

        • Date:
          Friday, 03 Apr 2009 - 21:57 UTC
          Elizabeth Moritz said:

          Lots to think about here

          I should probably mention that our lab has only had a handful of students graduate with PhDs so far, and none yet in my field (Microbiology). Thus, this will probably mean more flexibility but also no model to build from.

          @Maxine and Eva: I agree that it seems like making a list of significant results would be a good place to start as it will set the tone for the rest of the sections

          @Cristian: Hmm, interesting. I didn’t even think about including a section for pointing out why they’ll miss me when I’m gone…

          @Richard: Good point! I’ve heard quite a number of horror stories about formatting, Microsoft Word and the insertion of figures and legends after everything is written

        • Date:
          Tuesday, 07 Apr 2009 - 13:14 UTC
          Richard Wintle said:

          I’ve heard quite a number of horror stories about formatting, Microsoft Word and the insertion of figures and legends

          shudder Don’t get me started…

        • Date:
          Tuesday, 07 Apr 2009 - 14:13 UTC
          Bart Penders said:

          It is a lot easier to set up a thesis outline in countries in which PhD’s are awarded based upon cumulative publications (e.g. Netherlands):

          1. General Introduction
          2. Publication 1
          3. Publication 2
          4. Publication 3
          5. Publication 4
          6. Publication 5
          7. General Discussion

          However, getting the publications out there, that’s the hard part.

        • Date:
          Wednesday, 08 Apr 2009 - 15:02 UTC
          Richard Wintle said:

          I probably said this already, but you folks in The Netherlands also get to put fancy covers on, and have matching bookmarks made. Very nice.

          Downside – don’t you have to write the abstract in two languages?

        • Date:
          Thursday, 09 Apr 2009 - 08:51 UTC
          Bart Penders said:

          Richard,

          As far as the workload is concerned, that is a downside (a small one, though). I usually do see it as an upside, especially since most peers will only read the English abstract and most family members and friends (wondering what the hell you have been doing for 4-7 years) read the Dutch version. A more complete Table of Contents of a Dutch thesis would thus be:

          1. General Introduction
          2. Publication 1
          3. Publication 2
          4. Publication 3
          5. Publication 4
          6. Publication 5
          7. General Discussion
          8. English Abstract
          9. Dutch Abstract
          10. CV

          I do have to admit that I am one of the exceptions here, I wrote a book, with chapters and stuff (and an ISBN number, for that matter), but also with a fancy cover ;-)


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