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    <title>Recent replies to "CFSE staining"</title>
    <description>Recent replies to "CFSE staining"</description>
    <link>http://network.nature.com/forums/natureprotocols/304</link>
    <language>en-us</language>
    <ttl>40</ttl>
    <item>
      <title>Reply from M. RAHUMAN SHERIFF</title>
      <description>&lt;p&gt;Hi Aziz,&lt;br /&gt;Hope u got expertise in using &lt;span class="caps"&gt;CFSE&lt;/span&gt;.&lt;br /&gt;I would like to use it to stain HSCs.&lt;br /&gt;Can you suggest me a good protocol for that.&lt;/p&gt;


	&lt;p&gt;thank you&lt;/p&gt;</description>
      <pubDate>Thu, 20 Mar 2008 11:06:41 -0000</pubDate>
      <link>http://network.nature.com/forums/natureprotocols/304?page=1#reply-3201</link>
      <dc:creator>M. RAHUMAN SHERIFF</dc:creator>
      <guid>http://network.nature.com/forums/natureprotocols/304?page=1#reply-3201</guid>
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    <item>
      <title>Reply from Katharine Barnes</title>
      <description>&lt;p&gt;Hi Aziz,&lt;br /&gt;You might like to make the most of the fact that for the next month volume 2 of our &lt;a href="http://www.natureprotocols.com"&gt;Nature Protocols&lt;/a&gt; content is open access.&lt;/p&gt;


	&lt;p&gt;Here are a couple of protocols about assaying lymphocyte proliferation using &lt;span class="caps"&gt;CFSE&lt;/span&gt; and analysing by &lt;span class="caps"&gt;FACS&lt;/span&gt;:&lt;/p&gt;


	&lt;p&gt;&lt;a href="http://www.nature.com/nprot/journal/v2/n9/pdf/nprot.2007.296.pdf"&gt;Monitoring lymphocyte proliferation &lt;em&gt;in vitro&lt;/em&gt; and &lt;em&gt;in vivo&lt;/em&gt; with the intracellular fluorescent dye carboxyfluorescein diacetate succinimidyl ester&lt;/a&gt;&lt;/p&gt;


	&lt;p&gt;&lt;a href="http://www.nature.com/nprot/journal/v2/n9/pdf/nprot.2007.297.pdf"&gt;Measuring lymphocyte proliferation, survival and differentiation using &lt;span class="caps"&gt;CFSE&lt;/span&gt; time-series data&lt;/a&gt;&lt;/p&gt;


	&lt;p&gt;I hope they are useful.  Thanks for being such an active member of our forum.&lt;/p&gt;


	&lt;p&gt;Katharine&lt;/p&gt;</description>
      <pubDate>Fri, 21 Sep 2007 08:16:43 -0000</pubDate>
      <link>http://network.nature.com/forums/natureprotocols/304?page=1#reply-1161</link>
      <dc:creator>Katharine Barnes</dc:creator>
      <guid>http://network.nature.com/forums/natureprotocols/304?page=1#reply-1161</guid>
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      <title>Reply from Aziz Chentoufi</title>
      <description>&lt;p&gt;Thank u Hilary. Your protocol is quite similar to the one suggested by the manufacturer. But, in many papers they used very low concentration like 1- 2 micM for 10 min at RT. if I use PE-CyAb to stain my cells, it should be easy for compensation?&lt;br /&gt;Thank u for sharing your expertise&lt;br /&gt;Aziz&lt;/p&gt;</description>
      <pubDate>Mon, 30 Jul 2007 23:26:46 -0000</pubDate>
      <link>http://network.nature.com/forums/natureprotocols/304?page=1#reply-721</link>
      <dc:creator>Aziz Chentoufi</dc:creator>
      <guid>http://network.nature.com/forums/natureprotocols/304?page=1#reply-721</guid>
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      <title>Reply from Hilary Warren</title>
      <description>&lt;p&gt;Protocol for labelling &lt;span class="caps"&gt;PBMC&lt;/span&gt; with &lt;span class="caps"&gt;CFSE&lt;/span&gt;&lt;/p&gt;


	&lt;p&gt;&lt;span class="caps"&gt;PBMC&lt;/span&gt;, either freshly isolated or thawed from liquid nitrogen stored samples are resuspended in &lt;span class="caps"&gt;PBS&lt;/span&gt; containing 5% &lt;span class="caps"&gt;FCS&lt;/span&gt; at concentrations from 0.5&amp;#215;106/ml to 10&amp;#215;106/ml.  &lt;span class="caps"&gt;CFSE&lt;/span&gt; is diluted from a stock solution of 5mM (stored -20oC) just before use.  Prepare a 1/500 dilution (10 micromolar) and add in equal volume to the &lt;span class="caps"&gt;PBMC&lt;/span&gt; suspension.  If the volume is large do the addition whilst vortexing.  If the volume is small add the required volume to a &amp;#8216;non-wetted&amp;#8217; part of the plastic tube, then cap the tube and mix the two solutions rapidly.  After 5 minutes add 10 volumes of &lt;span class="caps"&gt;PBS&lt;/span&gt;/5% &lt;span class="caps"&gt;FCS&lt;/span&gt; and centrifuge.&lt;/p&gt;


	&lt;p&gt;The optimum concentration of &lt;span class="caps"&gt;CFSE&lt;/span&gt; needs to be determined for each batch of &lt;span class="caps"&gt;CFSE&lt;/span&gt;. If the concentration is too high the cells will not divide because of toxicity.&lt;/p&gt;


	&lt;p&gt;Note that &lt;span class="caps"&gt;CFSE&lt;/span&gt; staining of lymphocytes cannot be measured directly after labelling because of the extremely high fluorescence.  The majority of &lt;span class="caps"&gt;CFSE&lt;/span&gt; initially taken up by the cells is not stably incorporated and is lost within the first few days.&lt;br /&gt;Note also that uniform labelling with &lt;span class="caps"&gt;CFSE&lt;/span&gt; is essential to obtain clearly defined peaks following division.  That is, the coefficient of variation (CV) of the &lt;span class="caps"&gt;CFSE&lt;/span&gt;-labeled control unstimulated lymphocytes must be small.  This is in part determined by the technique for mixing &lt;span class="caps"&gt;CFSE&lt;/span&gt; with the cells, detailed above, and by the uniformity in cell volume of the population.&lt;/p&gt;


	&lt;p&gt;Normally &lt;span class="caps"&gt;CFSE&lt;/span&gt; analysis on the &lt;span class="caps"&gt;FACS&lt;/span&gt; would be on day 4 after stimulation of &lt;span class="caps"&gt;PBMC&lt;/span&gt; with mitogens.&lt;/p&gt;


	&lt;p&gt;The exact settings on the flow cytometer will depend on the particular instrument being used.  Have the &lt;span class="caps"&gt;FSC&lt;/span&gt;/SSC settings to clearly see the lymphocyte gate, and to have the voltages set so that the background of non-CFSE labelled cells is in the first decade of log.  If the cells are to be stained with other mAb, it is important to have &lt;span class="caps"&gt;CFSE&lt;/span&gt; cultures without mAb as well as unlabelled cultures with mAb to be able to set the correct compensations especially between FL-1 (CFSE) and PE labelled mAb (FL-2)&lt;/p&gt;</description>
      <pubDate>Mon, 23 Jul 2007 06:28:49 -0000</pubDate>
      <link>http://network.nature.com/forums/natureprotocols/304?page=1#reply-688</link>
      <dc:creator>Hilary Warren</dc:creator>
      <guid>http://network.nature.com/forums/natureprotocols/304?page=1#reply-688</guid>
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